Jscatter 1.9.0
1. Beginners Guide / Help
1.1. What are dataArray/dataList
1.2. First basic examples
1.3. Reading ASCII files
1.4. Creating from numpy arrays
1.5. Manipulating dataArray/dataList
1.6. Indexing dataArray/dataList and reducing
1.7. Fitting experimental data
1.8. Why Fits may fail
1.9. Plot experimental data and fit result
1.10. Save data and fit results
1.11. Additional stuff
2. dataArray
2.1. dataArray Class
2.2. Attribute Methods
2.3. Fit Methods
2.4. Housekeeping Methods
2.5. Convenience
3. dataList
3.1. dataList Class
3.2. Attribute Methods
3.3. Fit Methods
3.4. Housekeeping Methods
4. formel
4.1. Functions
4.2. Quadrature
4.3. Distribution of parameters
4.4. Parallel execution
4.5. Utilities
4.6. Centrifugation
4.7. NMR
4.8. Material Data
4.9. Constants and Tables
5. smallanglescattering (sas)
5.1. SAS smear/desmear 1D
5.2. SAS convenience
5.3. 2D sasImage
5.4. 2D sasImage convenience
5.5. Housekeeping
6. formfactor (ff)
6.1. Form Factors
6.2. Cloud of scatterers
7. structurefactor (sf)
7.1. Structure Factors
7.2. Hydrodynamics
7.3. Pair Correlation
7.4. Lattice
8. dynamic
8.1. Transform between domains
8.2. Time domain
8.3. Frequency domain
9. biomacromolecules (bio)
9.1. MDA universe
9.2. Formfactors
9.3. Effective diffusion of rigid structures
9.4. Intermediate scattering functions (ISF)
9.5. Normal modes
10. dls
contin()
contin_display()
readZetasizerNano()
11. Plotting
11.1. Using GracePlot
11.2. Using matplotlib
12. Examples
12.1. In a nutshell
12.2. Build models
12.3. Fitting 1D, 2D 3D …
12.4. References
12.5. Analysis of SAS data
12.6. Dynamic models
12.7. Biomacromolecules (bio)
12.8. Other stuff
13. Intention/Extending
13.1. Intention and Remarks
13.2. Extending/Contributing/Fortran
14. Installation
14.1. Dependencies
14.2. Standard “pip” installation/upgrade
14.3. Linux
14.4. macOS (Intel + Arm)
14.5. Windows
14.6. Jupyter Notebook
14.7. Using a cluster/headless mode
14.8. Testing
14.9. Troubleshooting and tips
14.10. Tips
15. Citing Jscatter
16. Changelog
Jscatter 1.9.0
Index
Index
A
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B
|
C
|
D
|
E
|
F
|
G
|
H
|
I
|
J
|
K
|
L
|
M
|
N
|
O
|
P
|
Q
|
R
|
S
|
T
|
U
|
V
|
W
|
X
|
Y
|
Z
A
aaHydrophobicity (in module jscatter.data)
aaVolume() (in module jscatter.formel)
addColumn() (jscatter.dataarray.dataArray method)
addDisplacement() (jscatter.bio.fakeBNM method)
(jscatter.bio.fakeVNM method)
addH_Pymol() (in module jscatter.bio)
Addsubplot() (jscatter.mpl.jsFigure method)
addXMLParameter() (in module jscatter.sas)
addZeroColumns() (jscatter.dataarray.dataArray method)
adhesiveHardSphere() (in module jscatter.sf)
AgBepeaks (in module jscatter.sasimagelib)
AgBeReference() (in module jscatter.sas)
align_vectors() (jscatter.sas.Rotation static method)
(jscatter.sasimagelib.Rotation static method)
all() (jscatter.dataarray.dataArray method)
allatommode() (jscatter.bio.NM method)
alongLine() (jscatter.sf.lattice method)
,
[1]
alternatingCoPolymer() (in module jscatter.ff)
animate() (jscatter.bio.NM method)
ANMA (class in jscatter.bio)
Annotation (class in jscatter.graceplot)
any() (jscatter.dataarray.dataArray method)
append() (jscatter.dataarray.dataList method)
(jscatter.sas.deque method)
(jscatter.sasimagelib.deque method)
appendleft() (jscatter.sas.deque method)
(jscatter.sasimagelib.deque method)
appendPoints() (jscatter.sf.pseudoRandomLattice method)
apply() (jscatter.sas.Rotation method)
(jscatter.sasimagelib.Rotation method)
approx_equal() (jscatter.sas.Rotation method)
(jscatter.sasimagelib.Rotation method)
argmax() (jscatter.dataarray.dataArray method)
argmin() (jscatter.dataarray.dataArray method)
argpartition() (jscatter.dataarray.dataArray method)
argsort() (jscatter.dataarray.dataArray method)
array (jscatter.dataarray.dataArray property)
(jscatter.sas.sasImage property)
(jscatter.sas.SubArray property)
(jscatter.sasimagelib.sasImage property)
,
[1]
(jscatter.sasimagelib.SubArray property)
,
[1]
(jscatter.sf.lattice property)
,
[1]
Arrow() (jscatter.mpl.jspaperAxes method)
as_davenport() (jscatter.sas.Rotation method)
(jscatter.sasimagelib.Rotation method)
as_euler() (jscatter.sas.Rotation method)
(jscatter.sasimagelib.Rotation method)
as_matrix() (jscatter.sas.Rotation method)
(jscatter.sasimagelib.Rotation method)
as_mrp() (jscatter.sas.Rotation method)
(jscatter.sasimagelib.Rotation method)
as_quat() (jscatter.sas.Rotation method)
(jscatter.sasimagelib.Rotation method)
as_rotvec() (jscatter.sas.Rotation method)
(jscatter.sasimagelib.Rotation method)
asdataArray() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
asImage() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
aslist (jscatter.dataarray.dataList property)
aspect_scale() (jscatter.graceplot.GracePlot method)
assign() (jscatter.graceplot.createColorTable method)
assign_color() (jscatter.graceplot.GracePlot method)
astype() (jscatter.dataarray.dataArray method)
attr (jscatter.dataarray.dataArray property)
(jscatter.dataarray.dataList property)
(jscatter.sas.SubArray property)
(jscatter.sasimagelib.SubArray property)
,
[1]
Autoscale() (jscatter.graceplot.GraceGraph method)
autoscale() (jscatter.graceplot.GraceGraph method)
Autoscale() (jscatter.mpl.jspaperAxes method)
autoscaleYinoverlapX() (in module jscatter.sas)
autotick() (jscatter.graceplot.GraceGraph method)
azimuthAverage() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
B
b (jscatter.sf.lattice property)
,
[1]
b2_incSol (jscatter.bio.scatteringUniverse property)
ball (jscatter.sf.lattice property)
,
[1]
balpha_m() (jscatter.sas.PickerDetPosition method)
(jscatter.sasimagelib.PickerDetPosition method)
balpha_p() (jscatter.sas.PickerDetPosition method)
(jscatter.sasimagelib.PickerDetPosition method)
Bar (class in jscatter.graceplot)
base (jscatter.dataarray.dataArray attribute)
bastep() (jscatter.sas.PickerDetPosition method)
(jscatter.sasimagelib.PickerDetPosition method)
bbeta_m() (jscatter.sas.PickerDetPosition method)
(jscatter.sasimagelib.PickerDetPosition method)
bbeta_p() (jscatter.sas.PickerDetPosition method)
(jscatter.sasimagelib.PickerDetPosition method)
bccLattice (class in jscatter.sf)
bcDensitySol (jscatter.bio.scatteringUniverse property)
bcenterx_m() (jscatter.sas.PickerDetPosition method)
(jscatter.sasimagelib.PickerDetPosition method)
bcenterx_p() (jscatter.sas.PickerDetPosition method)
(jscatter.sasimagelib.PickerDetPosition method)
bcentery_m() (jscatter.sas.PickerDetPosition method)
(jscatter.sasimagelib.PickerDetPosition method)
bcentery_p() (jscatter.sas.PickerDetPosition method)
(jscatter.sasimagelib.PickerDetPosition method)
bcstep() (jscatter.sas.PickerDetPosition method)
(jscatter.sasimagelib.PickerDetPosition method)
bdistance_m() (jscatter.sas.PickerDetPosition method)
(jscatter.sasimagelib.PickerDetPosition method)
bdistance_p() (jscatter.sas.PickerDetPosition method)
(jscatter.sasimagelib.PickerDetPosition method)
beaucage() (in module jscatter.ff)
bgamma_m() (jscatter.sas.PickerDetPosition method)
(jscatter.sasimagelib.PickerDetPosition method)
bgamma_p() (jscatter.sas.PickerDetPosition method)
(jscatter.sasimagelib.PickerDetPosition method)
bicelleRh() (in module jscatter.formel)
bin (jscatter.formel.imageHash property)
bispline() (jscatter.dataarray.dataList method)
bonded (jscatter.bio.NM property)
boseDistribution() (in module jscatter.formel)
box() (in module jscatter.formel)
boxVolume (jscatter.bio.scatteringUniverse property)
bravaisLattice (class in jscatter.sf)
breakbottom (jscatter.graceplot.frames attribute)
breakleft (jscatter.graceplot.frames attribute)
breakright (jscatter.graceplot.frames attribute)
breaktop (jscatter.graceplot.frames attribute)
brownianNMdiag (class in jscatter.bio)
bstep() (jscatter.sas.PickerDetPosition method)
(jscatter.sasimagelib.PickerDetPosition method)
bufferviscosity() (in module jscatter.formel)
Button (class in jscatter.sas)
(class in jscatter.sasimagelib)
byteswap() (jscatter.dataarray.dataArray method)
C
calibrateOffsetDetector() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
centerOfMass() (jscatter.sf.lattice method)
,
[1]
character (jscatter.graceplot.symbols attribute)
choose() (jscatter.dataarray.dataArray method)
Circle (class in jscatter.sas)
(class in jscatter.sasimagelib)
circle (jscatter.graceplot.symbols attribute)
clear() (jscatter.dataarray.dataList method)
Clear() (jscatter.graceplot.GraceGraph method)
clear() (jscatter.graceplot.GraceGraph method)
Clear() (jscatter.graceplot.GracePlot method)
clear() (jscatter.graceplot.GracePlot method)
Clear() (jscatter.mpl.jsFigure method)
(jscatter.mpl.jspaperAxes method)
clear() (jscatter.sas.deque method)
(jscatter.sasimagelib.deque method)
clip() (jscatter.dataarray.dataArray method)
close() (in module jscatter.mpl)
(jscatter.graceplot.GracePlot method)
Close() (jscatter.mpl.jsFigure method)
closed (jscatter.graceplot.frames attribute)
cloudScattering() (in module jscatter.ff)
columnIndex (jscatter.dataarray.dataArray property)
command_args (jscatter.graceplot.GracePlot attribute)
commonAttr (jscatter.dataarray.dataList property)
compress() (jscatter.dataarray.dataArray method)
concatenate() (jscatter.dataarray.dataArray method)
(jscatter.sas.Rotation static method)
(jscatter.sasimagelib.Rotation static method)
conj() (jscatter.dataarray.dataArray method)
conjugate() (jscatter.dataarray.dataArray method)
contin() (in module jscatter.dls)
contin_display() (in module jscatter.dls)
contourImage() (in module jscatter.mpl)
contourOnCube() (in module jscatter.mpl)
convert_e2w() (in module jscatter.dynamic)
convolve() (in module jscatter.dynamic)
(in module jscatter.formel)
copy() (jscatter.bio.scatteringUniverse method)
(jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
(jscatter.sas.deque method)
(jscatter.sasimagelib.deque method)
copyattr2elements() (jscatter.dataarray.dataList method)
copyFiles() (in module jscatter.sas)
copyUnivProp() (in module jscatter.bio)
count() (jscatter.dataarray.dataList method)
(jscatter.sas.deque method)
(jscatter.sasimagelib.deque method)
create_group() (jscatter.sas.Rotation class method)
(jscatter.sasimagelib.Rotation class method)
createColorTable (class in jscatter.graceplot)
createImageDescriptions() (in module jscatter.sas)
(in module jscatter.sasimagelib)
createImageFromArray() (in module jscatter.sas)
(in module jscatter.sasimagelib)
createLogPNG() (in module jscatter.sas)
(in module jscatter.sasimagelib)
createWaterBox() (in module jscatter.bio)
criticalSystem() (in module jscatter.sf)
cross (jscatter.graceplot.symbols attribute)
cstar() (in module jscatter.formel)
ctypes (jscatter.dataarray.dataArray attribute)
cuboid() (in module jscatter.ff)
cumprod() (jscatter.dataarray.dataArray method)
cumsum() (jscatter.dataarray.dataArray method)
cumulant() (in module jscatter.dynamic)
cumulantDLS() (in module jscatter.dynamic)
cylinder() (in module jscatter.ff)
D
d2oFract (jscatter.bio.scatteringUniverse property)
dA (in module jscatter.sas)
(in module jscatter.sasimagelib)
(in module jscatter.sf)
DAB() (in module jscatter.ff)
dashed (jscatter.graceplot.lines attribute)
Data (class in jscatter.graceplot)
data (jscatter.dataarray.dataArray attribute)
dataArray (class in jscatter.dataarray)
DataBar (class in jscatter.graceplot)
dataLim (jscatter.mpl.jspaperAxes attribute)
dataList (class in jscatter.dataarray)
dataset_type_name (jscatter.graceplot.Data attribute)
(jscatter.graceplot.DataBar attribute)
(jscatter.graceplot.DataXYBoxWhisker attribute)
(jscatter.graceplot.DataXYDX attribute)
(jscatter.graceplot.DataXYDXDX attribute)
(jscatter.graceplot.DataXYDXDXDYDY attribute)
(jscatter.graceplot.DataXYDXDY attribute)
(jscatter.graceplot.DataXYDY attribute)
(jscatter.graceplot.DataXYDYDY attribute)
(jscatter.graceplot.DataXYZ attribute)
DataXYBoxWhisker (class in jscatter.graceplot)
DataXYDX (class in jscatter.graceplot)
DataXYDXDX (class in jscatter.graceplot)
DataXYDXDXDYDY (class in jscatter.graceplot)
DataXYDXDY (class in jscatter.graceplot)
DataXYDY (class in jscatter.graceplot)
DataXYDYDY (class in jscatter.graceplot)
DataXYZ (class in jscatter.graceplot)
delete() (jscatter.dataarray.dataList method)
deque (class in jscatter.sas)
(class in jscatter.sasimagelib)
desmear() (in module jscatter.sas)
detachErrPlot() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
device (jscatter.dataarray.dataArray attribute)
diagonal() (jscatter.dataarray.dataArray method)
diamond (jscatter.graceplot.symbols attribute)
diamondLattice (class in jscatter.sf)
dielectricConstant() (in module jscatter.formel)
diffuseLamellarStack() (in module jscatter.sf)
diffusionHarmonicPotential() (in module jscatter.dynamic)
diffusionHarmonicPotential_w() (in module jscatter.dynamic)
diffusionInSphere_w() (in module jscatter.dynamic)
diffusionPeriodicPotential() (in module jscatter.dynamic)
diffusionTRUnivTensor() (in module jscatter.bio)
diffusionTRUnivYlm() (in module jscatter.bio)
dimension (jscatter.sf.lattice property)
,
[1]
disc() (in module jscatter.ff)
disconnect() (jscatter.sas.Button method)
(jscatter.sasimagelib.Button method)
Disconnected
displacement() (jscatter.bio.NM method)
dL (in module jscatter.sas)
(in module jscatter.sf)
dlattr() (jscatter.dataarray.dataList method)
doForList() (in module jscatter.formel)
dot() (jscatter.dataarray.dataArray method)
dot_dashed (jscatter.graceplot.lines attribute)
dotted (jscatter.graceplot.lines attribute)
doubleDiffusion() (in module jscatter.dynamic)
doubleStretchedExp_w() (in module jscatter.dynamic)
dropDecoratedCoreShell() (in module jscatter.ff)
Drot() (in module jscatter.formel)
DrotfromT12() (in module jscatter.formel)
DsoverDo() (in module jscatter.formel)
Dtrans() (in module jscatter.formel)
dtype (jscatter.dataarray.dataArray attribute)
(jscatter.dataarray.dataList property)
dump() (jscatter.dataarray.dataArray method)
dumps() (jscatter.dataarray.dataArray method)
dynamicSusceptibility() (in module jscatter.dynamic)
E
Ea() (in module jscatter.formel)
edensitySol (jscatter.bio.scatteringUniverse property)
eF() (jscatter.bio.brownianNMdiag method)
eFC() (jscatter.bio.ANMA method)
(jscatter.bio.brownianNMdiag method)
(jscatter.bio.vibNM method)
effectiveForceConstant() (jscatter.bio.ANMA method)
(jscatter.bio.brownianNMdiag method)
(jscatter.bio.fakeBNM method)
(jscatter.bio.fakeVNM method)
(jscatter.bio.vibNM method)
effectiveFriction() (jscatter.bio.brownianNMdiag method)
effectiveMass() (jscatter.bio.vibNM method)
eigenvalues (jscatter.bio.fakeBNM property)
(jscatter.bio.fakeVNM property)
(jscatter.bio.NM property)
eigenvectors (jscatter.bio.fakeVNM property)
(jscatter.bio.NM property)
eijk (in module jscatter.formel)
elastic_w() (in module jscatter.dynamic)
Elements (in module jscatter.data)
ellipsoid() (in module jscatter.ff)
ellipsoidFilledCylinder() (in module jscatter.ff)
eM() (jscatter.bio.vibNM method)
equillibrium() (jscatter.bio.fakeBNM method)
(jscatter.bio.fakeVNM method)
Errorbar (class in jscatter.graceplot)
errplot (jscatter.dataarray.dataArray property)
(jscatter.dataarray.dataList property)
errPlot() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
errPlotTitle() (jscatter.dataarray.dataArray method)
errPlottitle() (jscatter.dataarray.dataArray method)
errPlotTitle() (jscatter.dataarray.dataList method)
estimateError() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
etree_to_dict() (in module jscatter.sas)
(in module jscatter.sasimagelib)
Exit() (jscatter.graceplot.GracePlot method)
exit() (jscatter.graceplot.GracePlot method)
Exit() (jscatter.mpl.jsFigure method)
extend() (jscatter.dataarray.dataList method)
(jscatter.sas.deque method)
(jscatter.sasimagelib.deque method)
extendleft() (jscatter.sas.deque method)
(jscatter.sasimagelib.deque method)
extract_comm() (jscatter.dataarray.dataArray method)
extractAttribut() (jscatter.dataarray.dataList method)
extrapolate() (jscatter.dataarray.dataList method)
eY (jscatter.dataarray.dataArray property)
F
fa_cuboid() (in module jscatter.ff)
fa_disc() (in module jscatter.ff)
fa_ellipsoid() (in module jscatter.ff)
fakeBNM (class in jscatter.bio)
fakeVNM (class in jscatter.bio)
fastpdb2pqr() (in module jscatter.bio)
fccLattice (class in jscatter.sf)
felectron (in module jscatter.data)
fetch_pdb() (in module jscatter.bio)
fibonacciLatticePointsOnSphere() (in module jscatter.formel)
figure() (in module jscatter.mpl)
fill() (jscatter.dataarray.dataArray method)
fills (class in jscatter.graceplot)
filter() (jscatter.dataarray.dataList method)
(jscatter.sf.lattice method)
,
[1]
findCenterOfIntensity() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
finiteRouse() (in module jscatter.dynamic)
finiteZimm() (in module jscatter.dynamic)
fit() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
fixedFiniteRouse() (in module jscatter.dynamic)
fixedFiniteZimm() (in module jscatter.dynamic)
fixedWindowScanArrhenius() (in module jscatter.dynamic)
fjc() (in module jscatter.sf)
flags (jscatter.dataarray.dataArray attribute)
flat (jscatter.dataarray.dataArray attribute)
flatten() (jscatter.dataarray.dataArray method)
flowerlikeMicelle() (in module jscatter.ff)
focus() (jscatter.graceplot.GracePlot method)
forceConstant() (jscatter.bio.ANMA method)
fractal() (in module jscatter.sf)
frame() (jscatter.graceplot.GraceGraph method)
frames (class in jscatter.graceplot)
frequency() (jscatter.bio.ANMA method)
(jscatter.bio.brownianNMdiag method)
(jscatter.bio.vibNM method)
frequency2timeFF() (in module jscatter.dynamic)
from_davenport() (jscatter.sas.Rotation static method)
(jscatter.sasimagelib.Rotation static method)
from_euler() (jscatter.sas.Rotation static method)
(jscatter.sasimagelib.Rotation static method)
from_matrix() (jscatter.sas.Rotation static method)
(jscatter.sasimagelib.Rotation static method)
from_mrp() (jscatter.sas.Rotation static method)
(jscatter.sasimagelib.Rotation static method)
from_quat() (jscatter.sas.Rotation static method)
(jscatter.sasimagelib.Rotation static method)
from_rotvec() (jscatter.sas.Rotation static method)
(jscatter.sasimagelib.Rotation static method)
fromFunction() (jscatter.dataarray method)
fuzzyCylinder() (in module jscatter.ff)
G
gauss() (in module jscatter.formel)
gaussianChain() (in module jscatter.ff)
gaussianFilter() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
gen_axis() (jscatter.graceplot.GraceGraph method)
genGuinier() (in module jscatter.ff)
get_radius() (jscatter.sas.Circle method)
(jscatter.sasimagelib.Circle method)
getBayesSampler() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
getBeamWidth() (in module jscatter.sas)
getChi2Trace() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
getDistanceMatrix() (in module jscatter.bio)
getfield() (jscatter.dataarray.dataArray method)
getFreepar (jscatter.dataarray.dataArray property)
(jscatter.dataarray.dataList property)
getfromcomment() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
(jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
getHWHM() (in module jscatter.dynamic)
getNativeContacts() (in module jscatter.bio)
getOccupiedVolume() (in module jscatter.bio)
getPolar() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
getRadialReciprocalLattice() (jscatter.sf.rhombicLattice method)
,
[1]
getReciprocalLattice() (jscatter.sf.lattice method)
,
[1]
(jscatter.sf.rhombicLattice method)
,
[1]
getScatteringAngle() (jscatter.sf.rhombicLattice method)
,
[1]
getSurfaceVolumePoints() (in module jscatter.bio)
gf (in module jscatter.mpl)
grace (in module jscatter.sas)
(in module jscatter.sf)
grace() (jscatter.graceplot.GraceGraph method)
grace_command (jscatter.graceplot.GracePlot attribute)
GraceGraph (class in jscatter.graceplot)
GracePlot (class in jscatter.graceplot)
griddata() (in module jscatter.sas)
(in module jscatter.sasimagelib)
guess_bonds() (jscatter.bio.scatteringUniverse method)
guinier() (in module jscatter.ff)
guinierPorod() (in module jscatter.ff)
guinierPorod3d() (in module jscatter.ff)
H
h (in module jscatter.dynamic.fft)
halfopen (jscatter.graceplot.frames attribute)
haltonSequence() (in module jscatter.formel)
has_limit (jscatter.dataarray.dataArray property)
(jscatter.dataarray.dataList property)
hasConstrain (jscatter.dataarray.dataArray property)
(jscatter.dataarray.dataList property)
hasLimit (jscatter.dataarray.dataArray property)
(jscatter.dataarray.dataList property)
hbar (in module jscatter.dynamic.fft)
hcpLattice (class in jscatter.sf)
headless (jscatter.graceplot.GracePlot attribute)
hex (jscatter.formel.imageHash property)
hex2DLattice (class in jscatter.sf)
hexLattice (class in jscatter.sf)
hold() (jscatter.graceplot.GraceGraph method)
(jscatter.graceplot.GracePlot method)
honeycombLattice (class in jscatter.sf)
hullRad() (in module jscatter.bio)
hydrodynamicFunct() (in module jscatter.sf)
I
idealHelix() (in module jscatter.ff)
identity() (jscatter.sas.Rotation static method)
(jscatter.sasimagelib.Rotation static method)
imag (jscatter.dataarray.dataArray attribute)
imageHash (class in jscatter.formel)
inCylinder() (jscatter.sf.lattice method)
,
[1]
index() (jscatter.dataarray.dataList method)
(jscatter.sas.deque method)
(jscatter.sasimagelib.deque method)
inEllipsoid() (jscatter.sf.lattice method)
,
[1]
inheritDocstringFrom() (in module jscatter.graceplot)
inhomogeneousCylinder() (in module jscatter.ff)
inhomogeneousSphere() (in module jscatter.ff)
inParallelepiped() (jscatter.sf.lattice method)
,
[1]
insert() (jscatter.dataarray.dataList method)
(jscatter.sas.deque method)
(jscatter.sasimagelib.deque method)
inSphere() (jscatter.sf.lattice method)
,
[1]
int (jscatter.formel.imageHash property)
integralZimm() (in module jscatter.dynamic)
interp() (jscatter.dataarray.dataArray method)
interpAll() (jscatter.dataarray.dataArray method)
interpolate() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
interpolateMaskedRadial() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
intScatFuncOU() (in module jscatter.bio)
intScatFuncPMode() (in module jscatter.bio)
intScatFuncYlm() (in module jscatter.bio)
inv() (jscatter.sas.Rotation method)
(jscatter.sasimagelib.Rotation method)
invRelaxTime() (jscatter.bio.brownianNMdiag method)
iRT() (jscatter.bio.brownianNMdiag method)
is_open() (jscatter.graceplot.GracePlot method)
(jscatter.mpl.jsFigure method)
is_terminal() (in module jscatter.mpl)
isLattice (jscatter.sf.lattice attribute)
,
[1]
isort() (jscatter.dataarray.dataArray method)
isRhombic (jscatter.sf.rhombicLattice attribute)
,
[1]
item() (jscatter.dataarray.dataArray method)
itemsize (jscatter.dataarray.dataArray attribute)
iX (jscatter.sas.sasImage property)
(jscatter.sasimagelib.sasImage property)
,
[1]
iY (jscatter.sas.sasImage property)
(jscatter.sasimagelib.sasImage property)
,
[1]
J
jscatter.bio
module
,
[1]
jscatter.dls
module
jscatter.dynamic
module
,
[1]
jscatter.examples
module
jscatter.ff
module
,
[1]
jscatter.ff.cloudscattering
module
jscatter.formel
module
,
[1]
jscatter.graceplot
module
jscatter.mpl
module
jscatter.sas
module
,
[1]
jscatter.sasimagelib
module
,
[1]
jscatter.sf
module
,
[1]
jsFigure (class in jscatter.mpl)
jspaperAxes (class in jscatter.mpl)
jumpDiff_w() (in module jscatter.dynamic)
jumpDiffusion() (in module jscatter.dynamic)
K
k (in module jscatter.dynamic.fft)
k_b (jscatter.bio.fakeBNM property)
kill() (jscatter.graceplot.GraceGraph method)
killErrPlot() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
kT (jscatter.bio.NM property)
kTallatommode() (jscatter.bio.NM method)
kTdisplacement() (jscatter.bio.NM method)
kTdisplacementNM() (jscatter.bio.NM method)
kTrmsd() (jscatter.bio.NM method)
kTrmsdNM() (jscatter.bio.NM method)
L
Label (class in jscatter.graceplot)
lamLattice (class in jscatter.sf)
lastSelection (jscatter.sf.lattice property)
,
[1]
lattice (class in jscatter.sf)
,
[1]
latticeFromCIF (class in jscatter.sf)
latticeFromMDA (class in jscatter.sf)
latticeStructureFactor() (in module jscatter.sf)
latticeVectorsFromLatticeConstants() (in module jscatter.sf)
Legend() (jscatter.graceplot.GraceGraph method)
legend() (jscatter.graceplot.GraceGraph method)
(jscatter.graceplot.GracePlot method)
Legend() (jscatter.mpl.jsFigure method)
(jscatter.mpl.jspaperAxes method)
len (jscatter.graceplot.createColorTable property)
Line (class in jscatter.graceplot)
line() (jscatter.graceplot.GraceGraph method)
Line() (jscatter.mpl.jsFigure method)
linearChainORZ() (in module jscatter.dynamic)
(in module jscatter.ff)
LinearNDInterpolator (class in jscatter.sas)
(class in jscatter.sasimagelib)
linearPearls() (in module jscatter.ff)
lineAverage() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
lineFindCenter() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
lines (class in jscatter.graceplot)
linlog() (jscatter.mpl.jspaperAxes method)
list (jscatter.graceplot.createColorTable property)
load_parameter_file() (jscatter.graceplot.GracePlot method)
locateFiles() (in module jscatter.sas)
loglin() (jscatter.mpl.jspaperAxes method)
loglist() (in module jscatter.formel)
(in module jscatter.sas)
lognorm() (in module jscatter.formel)
long_dashed (jscatter.graceplot.lines attribute)
lorentz() (in module jscatter.formel)
lorentz_w() (in module jscatter.dynamic)
M
magnitude() (jscatter.sas.Rotation method)
(jscatter.sasimagelib.Rotation method)
makeErrPlot() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
makeNewErrPlot() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
mask4Polygon() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
maskbelowLine() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
maskCircle() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
maskFromImage() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
maskRegion() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
maskRegions() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
maskReset() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
maskSectors() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
maskTriangle() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
max() (jscatter.dataarray.dataArray method)
maxlen (jscatter.sas.deque attribute)
(jscatter.sasimagelib.deque attribute)
mean() (jscatter.dataarray.dataArray method)
(jscatter.sas.Rotation method)
(jscatter.sasimagelib.Rotation method)
memoize() (in module jscatter.formel)
merge() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
mergeAttribut() (jscatter.dataarray.dataList method)
mergePDBModel() (in module jscatter.bio)
methylRotation() (in module jscatter.dynamic)
min() (jscatter.dataarray.dataArray method)
mirror_w() (in module jscatter.dynamic)
modelValues() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
module
jscatter.bio
,
[1]
jscatter.dls
jscatter.dynamic
,
[1]
jscatter.examples
jscatter.ff
,
[1]
jscatter.ff.cloudscattering
jscatter.formel
,
[1]
jscatter.graceplot
jscatter.mpl
jscatter.sas
,
[1]
jscatter.sasimagelib
,
[1]
jscatter.sf
,
[1]
molarity() (in module jscatter.formel)
move() (jscatter.sf.lattice method)
,
[1]
moveSAXSPACE() (in module jscatter.sas)
mPDA() (in module jscatter.formel)
mplot() (in module jscatter.mpl)
mT (jscatter.dataarray.dataArray attribute)
Multi() (jscatter.graceplot.GracePlot method)
multi() (jscatter.graceplot.GracePlot method)
Multi() (jscatter.mpl.jsFigure method)
multiArmStarORZ() (in module jscatter.dynamic)
(in module jscatter.ff)
multilamellarVesicles() (in module jscatter.ff)
multilayer() (in module jscatter.ff)
multiParDistributedAverage() (in module jscatter.formel)
multiShellBicelle() (in module jscatter.ff)
multiShellCylinder() (in module jscatter.ff)
multiShellDisc() (in module jscatter.ff)
multiShellEllipsoid() (in module jscatter.ff)
multiShellSphere() (in module jscatter.ff)
N
nakedCopy() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
name (jscatter.dataarray.dataArray property)
(jscatter.mpl.jspaperAxes attribute)
names (jscatter.dataarray.dataList property)
(jscatter.graceplot.createColorTable property)
nbytes (jscatter.dataarray.dataArray attribute)
ndim (jscatter.dataarray.dataArray attribute)
NearestNDInterpolator (class in jscatter.sas)
(class in jscatter.sasimagelib)
new_graph() (jscatter.graceplot.GracePlot method)
NM (class in jscatter.bio)
non_bonded (jscatter.bio.NM property)
none (jscatter.graceplot.fills attribute)
(jscatter.graceplot.lines attribute)
(jscatter.graceplot.symbols attribute)
nonzero() (jscatter.dataarray.dataArray method)
nonzerob (jscatter.sf.lattice property)
,
[1]
nscatIntUniv() (in module jscatter.bio)
Nscatlength (in module jscatter.data)
nSiteJumpDiffusion_w() (in module jscatter.dynamic)
numberOfAtoms() (jscatter.sf.lattice method)
,
[1]
numDensitySol (jscatter.bio.scatteringUniverse property)
O
on_button_press() (jscatter.sas.PickerBeamCenter method)
(jscatter.sas.PickerDetPosition method)
(jscatter.sasimagelib.PickerBeamCenter method)
(jscatter.sasimagelib.PickerDetPosition method)
on_clicked() (jscatter.sas.Button method)
(jscatter.sasimagelib.Button method)
on_keypress() (jscatter.sas.PickerBeamCenter method)
(jscatter.sasimagelib.PickerBeamCenter method)
on_off() (in module jscatter.graceplot)
on_scroll() (jscatter.sas.PickerBeamCenter method)
(jscatter.sasimagelib.PickerBeamCenter method)
ones() (jscatter.dataarray method)
opaque (jscatter.graceplot.fills attribute)
orientedCloudScattering() (in module jscatter.ff)
orientedCloudScattering3Dff() (in module jscatter.ff)
orientedLatticeStructureFactor() (in module jscatter.sf)
ornsteinZernike() (in module jscatter.ff)
output() (jscatter.graceplot.Annotation method)
(jscatter.graceplot.Bar method)
(jscatter.graceplot.Data method)
(jscatter.graceplot.Errorbar method)
(jscatter.graceplot.Label method)
(jscatter.graceplot.Line method)
(jscatter.graceplot.Symbol method)
(jscatter.graceplot.Tick method)
(jscatter.graceplot.TickLabel method)
output_differences() (jscatter.graceplot.Data method)
P
pAC() (in module jscatter.formel)
parAdaptiveCubature() (in module jscatter.formel)
parDistributedAverage() (in module jscatter.formel)
parQuadratureAdaptiveClenshawCurtis() (in module jscatter.formel)
parQuadratureAdaptiveGauss() (in module jscatter.formel)
parQuadratureFixedGauss() (in module jscatter.formel)
parQuadratureFixedGaussxD() (in module jscatter.formel)
parQuadratureSimpson() (in module jscatter.formel)
parseXML() (in module jscatter.sas)
(in module jscatter.sasimagelib)
partition() (jscatter.dataarray.dataArray method)
pDA() (in module jscatter.formel)
pdb2pqr() (in module jscatter.bio)
pearlNecklace() (in module jscatter.ff)
PercusYevick() (in module jscatter.sf)
PercusYevick1D() (in module jscatter.sf)
PercusYevick2D() (in module jscatter.sf)
perrinFrictionFactor() (in module jscatter.formel)
phase() (in module jscatter.sas)
(in module jscatter.sasimagelib)
pickBeamcenter() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
PickerBeamCenter (class in jscatter.sas)
(class in jscatter.sasimagelib)
PickerDetPosition (class in jscatter.sas)
(class in jscatter.sasimagelib)
planeSide() (jscatter.sf.lattice method)
,
[1]
Plot() (jscatter.graceplot.GraceGraph method)
plot() (jscatter.graceplot.GraceGraph method)
(jscatter.graceplot.GracePlot method)
Plot() (jscatter.mpl.jsFigure method)
plot() (jscatter.mpl.jsFigure method)
Plot() (jscatter.mpl.jspaperAxes method)
plot() (jscatter.mpl.jspaperAxes method)
plot2Dimage() (in module jscatter.mpl)
plotBeamProfile() (in module jscatter.sas)
plus (jscatter.graceplot.symbols attribute)
points (jscatter.sf.lattice property)
,
[1]
polyfit() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
polygon() (in module jscatter.ff)
polygonPoints() (in module jscatter.ff)
polymerCorLength() (in module jscatter.ff)
pop() (jscatter.dataarray.dataList method)
(jscatter.sas.deque method)
(jscatter.sasimagelib.deque method)
popleft() (jscatter.sas.deque method)
(jscatter.sasimagelib.deque method)
powerLaw() (in module jscatter.ff)
pQ (jscatter.sas.sasImage property)
(jscatter.sasimagelib.sasImage property)
,
[1]
pQACC() (in module jscatter.formel)
pQAG() (in module jscatter.formel)
pQaxes() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
pQFG() (in module jscatter.formel)
pQFGxD() (in module jscatter.formel)
pQnorm (jscatter.sas.sasImage property)
(jscatter.sasimagelib.sasImage property)
,
[1]
pQS() (in module jscatter.formel)
prepareBeamProfile() (in module jscatter.sas)
prepScatGroups() (in module jscatter.bio)
prism() (in module jscatter.ff)
prod() (jscatter.dataarray.dataArray method)
protectedNames (in module jscatter.dataarray)
prune() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
(jscatter.sf.lattice method)
,
[1]
pseudoRandomLattice (class in jscatter.sf)
put() (jscatter.dataarray.dataArray method)
Q
qEwaldSphere() (in module jscatter.formel)
qlist (jscatter.bio.scatteringUniverse property)
R
radial3DLSF() (in module jscatter.sf)
radialAverage() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
radialorientedLSF() (in module jscatter.sf)
radius (jscatter.sas.Circle property)
(jscatter.sasimagelib.Circle property)
radiusBohr (in module jscatter.data)
raftDecoratedCoreShell() (in module jscatter.ff)
random() (jscatter.sas.Rotation static method)
(jscatter.sasimagelib.Rotation static method)
randomLattice (class in jscatter.sf)
randomPointsInCube() (in module jscatter.formel)
randomPointsOnSphere() (in module jscatter.formel)
ravel() (jscatter.dataarray.dataArray method)
raw() (jscatter.bio.fakeBNM method)
(jscatter.bio.fakeVNM method)
(jscatter.bio.NM method)
readHydroproResult() (in module jscatter.bio)
readImages() (in module jscatter.sas)
(in module jscatter.sasimagelib)
readpdh() (in module jscatter.sas)
readZetasizerNano() (in module jscatter.dls)
real (jscatter.dataarray.dataArray attribute)
recalibrateDetDistance() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
redraw() (jscatter.graceplot.GraceGraph method)
(jscatter.graceplot.GracePlot method)
reduce() (jscatter.sas.Rotation method)
(jscatter.sasimagelib.Rotation method)
reducedChi2k() (jscatter.dataarray.dataList method)
reduceSize() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
refineFit() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
regrid() (in module jscatter.mpl)
(jscatter.dataarray.dataArray method)
regularizedEM() (jscatter.dataarray.dataList method)
remove() (jscatter.dataarray.dataList method)
(jscatter.sas.deque method)
(jscatter.sasimagelib.deque method)
removeSpikes() (in module jscatter.sas)
removeSpikesMinmaxMethod() (in module jscatter.sas)
repeat() (jscatter.dataarray.dataArray method)
resetlast() (jscatter.graceplot.GraceGraph method)
(jscatter.graceplot.GracePlot method)
Resetlast() (jscatter.mpl.jspaperAxes method)
resFunct() (in module jscatter.sas)
resFunctExplicit() (in module jscatter.sas)
reshape() (jscatter.dataarray.dataArray method)
resize() (jscatter.dataarray.dataArray method)
(jscatter.graceplot.GracePlot method)
resolution (jscatter.graceplot.GracePlot attribute)
resolution() (in module jscatter.dynamic)
resolution_w() (in module jscatter.dynamic)
resumeAttrTxt() (jscatter.dataarray.dataArray method)
reverse() (jscatter.dataarray.dataList method)
(jscatter.sas.deque method)
(jscatter.sasimagelib.deque method)
rhombicLattice (class in jscatter.sf)
,
[1]
ringChainORZ() (in module jscatter.dynamic)
ringORZ() (in module jscatter.ff)
ringPolymer() (in module jscatter.ff)
RMSA() (in module jscatter.sf)
rmsd() (jscatter.bio.NM method)
rotate() (jscatter.sas.deque method)
(jscatter.sasimagelib.deque method)
(jscatter.sf.lattice method)
,
[1]
rotateAroundhkl() (jscatter.sf.rhombicLattice method)
,
[1]
rotatebyMatrix() (jscatter.sf.rhombicLattice method)
,
[1]
rotateGrid2hkl() (jscatter.sf.lattice method)
,
[1]
rotatehkl2Vector() (jscatter.sf.rhombicLattice method)
,
[1]
rotatePlane2hkl() (jscatter.sf.rhombicLattice method)
,
[1]
rotatePlaneAroundhkl() (jscatter.sf.rhombicLattice method)
,
[1]
Rotation (class in jscatter.sas)
(class in jscatter.sasimagelib)
rotationMatrix() (in module jscatter.formel)
rotDiffusion_w() (in module jscatter.dynamic)
round() (jscatter.dataarray.dataArray method)
rphitheta2xyz() (in module jscatter.formel)
runAll() (in module jscatter.examples)
runExample() (in module jscatter.examples)
runHydropro() (in module jscatter.bio)
S
sasImage (class in jscatter.sas)
(class in jscatter.sasimagelib)
,
[1]
save() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
Save() (jscatter.graceplot.GracePlot method)
save() (jscatter.graceplot.GracePlot method)
Save() (jscatter.mpl.jsFigure method)
saveAsTIF() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
savelastErrPlot() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
savetext() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
savetxt() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
scatIntUniv() (in module jscatter.bio)
scatIntUnivYlm() (in module jscatter.bio)
scatter3d() (in module jscatter.mpl)
scatteringFromSizeDistribution() (in module jscatter.formel)
scatteringLengthDensityCalc() (in module jscatter.formel)
scatteringUniverse (class in jscatter.bio)
schulzDistribution() (in module jscatter.formel)
sCI() (jscatter.dataarray.dataList method)
scLattice (class in jscatter.sf)
searchsorted() (jscatter.dataarray.dataArray method)
sedimentationCoefficient() (in module jscatter.formel)
sedimentationProfile() (in module jscatter.formel)
sedimentationProfileFaxen() (in module jscatter.formel)
send_commands() (jscatter.graceplot.GracePlot method)
set() (jscatter.mpl.jsFigure method)
(jscatter.mpl.jspaperAxes method)
(jscatter.sas.Circle method)
(jscatter.sasimagelib.Circle method)
set_b() (jscatter.sf.lattice method)
,
[1]
set_bsel() (jscatter.sf.lattice method)
,
[1]
set_radius() (jscatter.sas.Circle method)
(jscatter.sasimagelib.Circle method)
setattr() (jscatter.dataarray.dataArray method)
(jscatter.sas.SubArray method)
(jscatter.sasimagelib.SubArray method)
,
[1]
setAttrFromImage() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
setColumnIndex() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
setConstrain() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
setDetectorDistance() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
setDetectorPosition() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
setfield() (jscatter.dataarray.dataArray method)
setflags() (jscatter.dataarray.dataArray method)
setLimit() (jscatter.dataarray.dataArray method)
setlimit() (jscatter.dataarray.dataArray method)
setLimit() (jscatter.dataarray.dataList method)
setlimit() (jscatter.dataarray.dataList method)
setPixelSize() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
setPlaneCenter() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
setPlaneOrientation() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
setSolvent() (jscatter.bio.scatteringUniverse method)
SetView() (jscatter.graceplot.GraceGraph method)
(jscatter.graceplot.GracePlot method)
(jscatter.mpl.jspaperAxes method)
setWavelength() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
shape (jscatter.bio.NM property)
(jscatter.dataarray.dataArray attribute)
(jscatter.dataarray.dataList property)
(jscatter.formel.imageHash property)
(jscatter.sas.Rotation property)
(jscatter.sasimagelib.Rotation property)
(jscatter.sf.lattice property)
,
[1]
shapeall (jscatter.sf.lattice property)
,
[1]
shared_close() (in module jscatter.formel)
shared_create() (in module jscatter.formel)
shared_recover() (in module jscatter.formel)
shiftAndBinning() (in module jscatter.dynamic)
shiftbyfactor() (jscatter.graceplot.GraceGraph method)
(jscatter.graceplot.GracePlot method)
shortprint() (in module jscatter.sas)
(in module jscatter.sasimagelib)
show() (in module jscatter.mpl)
Show() (jscatter.mpl.jsFigure method)
show() (jscatter.mpl.jsFigure method)
(jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
(jscatter.sf.lattice method)
,
[1]
showattr() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
(jscatter.sas.SubArray method)
(jscatter.sasimagelib.SubArray method)
,
[1]
showColors() (in module jscatter.mpl)
showExample() (in module jscatter.examples)
showExampleList() (in module jscatter.examples)
showlastErrPlot() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
showlastErrPlot2D() (in module jscatter.mpl)
showPolar() (jscatter.sas.sasImage method)
(jscatter.sasimagelib.sasImage method)
,
[1]
sImemoize() (in module jscatter.sas)
(in module jscatter.sasimagelib)
similarity() (jscatter.formel.imageHash method)
simpleDiffusion() (in module jscatter.dynamic)
simpleQuadratureSimpson() (in module jscatter.formel)
simpson() (in module jscatter.sas)
simulate() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
single (jscatter.sas.Rotation property)
(jscatter.sasimagelib.Rotation property)
size (jscatter.dataarray.dataArray attribute)
(jscatter.formel.imageHash property)
smear() (in module jscatter.sas)
smooth() (in module jscatter.formel)
(in module jscatter.sas)
solid (jscatter.graceplot.fills attribute)
(jscatter.graceplot.lines attribute)
solveOptimizedRouseZimm() (in module jscatter.dynamic)
sort() (jscatter.dataarray.dataArray method)
(jscatter.dataarray.dataList method)
sphere() (in module jscatter.ff)
sphereAverage() (in module jscatter.formel)
sphereCoreShell() (in module jscatter.ff)
sphereCoreShellGaussianCorona() (in module jscatter.ff)
sphereFuzzySurface() (in module jscatter.ff)
sphereGaussianCorona() (in module jscatter.ff)
spines (jscatter.mpl.jspaperAxes attribute)
sq2gr() (in module jscatter.sf)
sqLattice (class in jscatter.sf)
sQS() (in module jscatter.formel)
square (jscatter.graceplot.symbols attribute)
squeeze() (jscatter.dataarray.dataArray method)
stacked() (jscatter.graceplot.GracePlot method)
star (jscatter.graceplot.symbols attribute)
std() (jscatter.dataarray.dataArray method)
stickyHardSphere() (in module jscatter.sf)
stretchedExp() (in module jscatter.dynamic)
stretchedExp_beta05_w() (in module jscatter.dynamic)
stretchedExp_w() (in module jscatter.dynamic)
SubArray (class in jscatter.sas)
(class in jscatter.sasimagelib)
,
[1]
subarray (in module jscatter.sas)
(in module jscatter.sasimagelib)
Subtitle() (jscatter.graceplot.GraceGraph method)
subtitle() (jscatter.graceplot.GraceGraph method)
(jscatter.graceplot.GracePlot method)
Subtitle() (jscatter.mpl.jsFigure method)
(jscatter.mpl.jspaperAxes method)
sum() (jscatter.dataarray.dataArray method)
superball() (in module jscatter.ff)
surface() (in module jscatter.mpl)
swapaxes() (jscatter.dataarray.dataArray method)
Symbol (class in jscatter.graceplot)
symbols (class in jscatter.graceplot)
T
T (jscatter.dataarray.dataArray attribute)
T1overT2() (in module jscatter.formel)
take() (jscatter.dataarray.dataArray method)
test() (in module jscatter.graceplot)
(in module jscatter.mpl)
teubnerStrey() (in module jscatter.ff)
text() (jscatter.graceplot.GraceGraph method)
(jscatter.graceplot.GracePlot method)
Text() (jscatter.mpl.jsFigure method)
(jscatter.mpl.jspaperAxes method)
threeLorentz_w() (in module jscatter.dynamic)
Tick (class in jscatter.graceplot)
TickLabel (class in jscatter.graceplot)
time2frequencyFF() (in module jscatter.dynamic)
Title() (jscatter.graceplot.GraceGraph method)
title() (jscatter.graceplot.GraceGraph method)
(jscatter.graceplot.GracePlot method)
Title() (jscatter.mpl.jsFigure method)
(jscatter.mpl.jspaperAxes method)
titrationProfile() (in module jscatter.bio)
to_device() (jscatter.dataarray.dataArray method)
tobytes() (jscatter.dataarray.dataArray method)
tofile() (jscatter.dataarray.dataArray method)
tolist() (jscatter.dataarray.dataArray method)
trace() (jscatter.dataarray.dataArray method)
transDiff() (in module jscatter.dynamic)
transDiff_w() (in module jscatter.dynamic)
transmissionCorrection() (in module jscatter.sas)
transpose() (jscatter.dataarray.dataArray method)
transposeAttribute() (jscatter.dataarray.dataList method)
transRotDiffusion() (in module jscatter.dynamic)
trapezoid() (in module jscatter.sas)
triangle_down (jscatter.graceplot.symbols attribute)
triangle_left (jscatter.graceplot.symbols attribute)
triangle_right (jscatter.graceplot.symbols attribute)
triangle_up (jscatter.graceplot.symbols attribute)
triaxialEllipsoid() (in module jscatter.ff)
twoYukawa() (in module jscatter.sf)
type (jscatter.sf.lattice property)
,
[1]
U
u2Debye() (in module jscatter.dynamic)
unitCellAtomPositions (jscatter.sf.rhombicLattice property)
,
[1]
update() (jscatter.sas.PickerBeamCenter method)
(jscatter.sas.PickerDetPosition method)
(jscatter.sasimagelib.PickerBeamCenter method)
(jscatter.sasimagelib.PickerDetPosition method)
update_data() (jscatter.graceplot.GraceGraph method)
updateall() (jscatter.graceplot.GracePlot method)
V
var() (jscatter.dataarray.dataArray method)
vdwradii (in module jscatter.data)
vectorhkl() (jscatter.sf.rhombicLattice method)
,
[1]
vibkTDisplacementNM() (jscatter.bio.brownianNMdiag method)
vibkTrmsdNM() (jscatter.bio.brownianNMdiag method)
vibNM (class in jscatter.bio)
(jscatter.bio.brownianNMdiag attribute)
view() (jscatter.bio.scatteringUniverse method)
(jscatter.dataarray.dataArray method)
viscosity() (in module jscatter.formel)
voigt() (in module jscatter.formel)
(in module jscatter.sas)
W
watercompressibility() (in module jscatter.formel)
(in module jscatter.sas)
waterdensity() (in module jscatter.formel)
(in module jscatter.sas)
waterXrayScattering() (in module jscatter.sas)
weakPolyelectrolyte() (in module jscatter.sf)
weights (jscatter.bio.fakeBNM property)
where() (jscatter.dataarray.dataArray method)
whoHasAttributes (jscatter.dataarray.dataList property)
wormlikeChain() (in module jscatter.ff)
write() (jscatter.graceplot.GracePlot method)
X
X (jscatter.dataarray.dataArray property)
(jscatter.sf.lattice property)
,
[1]
x_format_string (jscatter.graceplot.Data attribute)
Xall (jscatter.sf.lattice property)
,
[1]
xaxis (jscatter.mpl.jspaperAxes attribute)
Xaxis() (jscatter.graceplot.GraceGraph method)
xaxis() (jscatter.graceplot.GraceGraph method)
(jscatter.graceplot.GracePlot method)
Xaxis() (jscatter.mpl.jsFigure method)
(jscatter.mpl.jspaperAxes method)
xlabel() (jscatter.graceplot.GraceGraph method)
(jscatter.graceplot.GracePlot method)
xlimit() (jscatter.graceplot.GraceGraph method)
(jscatter.graceplot.GracePlot method)
xrayFFatomic (in module jscatter.data)
xscatIntUniv() (in module jscatter.bio)
xsldSol (jscatter.bio.scatteringUniverse property)
XYZ (jscatter.sf.lattice property)
,
[1]
xyz2rphitheta() (in module jscatter.formel)
XYZall (jscatter.sf.lattice property)
,
[1]
Y
Y (jscatter.dataarray.dataArray property)
(jscatter.sf.lattice property)
,
[1]
y_format_string (jscatter.graceplot.Data attribute)
Yall (jscatter.sf.lattice property)
,
[1]
yaxis (jscatter.mpl.jspaperAxes attribute)
Yaxis() (jscatter.graceplot.GraceGraph method)
yaxis() (jscatter.graceplot.GraceGraph method)
(jscatter.graceplot.GracePlot method)
Yaxis() (jscatter.mpl.jsFigure method)
(jscatter.mpl.jspaperAxes method)
ylabel() (jscatter.graceplot.GraceGraph method)
(jscatter.graceplot.GracePlot method)
ylimit() (jscatter.graceplot.GraceGraph method)
(jscatter.graceplot.GracePlot method)
Z
Z (jscatter.sf.lattice property)
,
[1]
Zall (jscatter.sf.lattice property)
,
[1]
zeros() (in module jscatter.sas)
(jscatter.dataarray method)
zilmanGranekBicontinious() (in module jscatter.dynamic)
zilmanGranekLamellar() (in module jscatter.dynamic)